esv3681751
- Organism: Homo sapiens
- Study:estd217 (Besenbacher et al. 2015)
- Variant Type:complex substitution
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,871
- Publication(s):Besenbacher et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 487 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 224 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 220 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 390 SVs from 52 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3681751 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NC_000011.10 | Chr11 | 1,078,673 | 1,081,543 |
| esv3681751 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_3 | First Pass | NT_187681.1 | Chr11|NT_1 87681.1 | 153,210 | 153,932 |
| esv3681751 | Remapped | Pass | GRCh38.p12 | PATCHES | Second Pass | NW_015148966.1 | Chr11|NW_0 15148966.1 | 66,390 | 67,689 |
| esv3681751 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 1,078,817 | 1,079,539 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv16467249 | complex substitution | Sequencing | de novo sequence assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| essv16467249 | Remapped | Perfect | GRCh38.p12 | First Pass | NT_187681.1 | Chr11|NT_1 87681.1 | 153,210 | 153,932 |
| essv16467249 | Remapped | Pass | GRCh38.p12 | Second Pass | NW_015148966.1 | Chr11|NW_0 15148966.1 | 66,390 | 67,689 |
| essv16467249 | Remapped | Pass | GRCh38.p12 | Second Pass | NC_000011.10 | Chr11 | 1,078,673 | 1,081,543 |
| essv16467249 | Submitted genomic | GRCh37 (hg19) | NC_000011.9 | Chr11 | 1,078,817 | 1,079,539 |