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dbVar

Database of genomic structural variation

esv3689139

Organism: Homo sapiens

Study:estd220 (Pettigrew et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:71,699

Publication(s):Pettigrew et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 737 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):16,092,262-16,163,960

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3689139	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	16,092,262	16,092,262	16,163,959	16,163,960
esv3689139	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	15,949,771	15,949,771	16,021,468	16,021,469

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16503446	deletion	FR-04	SNP array	SNP genotyping analysis	36

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16503446	Remapped	Perfect	NC_000008.11:g.(16 092262_16092262)_( 16163959_16163960) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	16,092,262	16,092,262	16,163,959	16,163,960
essv16503446	Submitted genomic		NC_000008.10:g.(15 949771_15949771)_( 16021468_16021469) del71697	GRCh37 (hg19)		NC_000008.10	Chr8	15,949,771	15,949,771	16,021,468	16,021,469

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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