esv3691236
- Organism: Homo sapiens
- Study:estd220 (Pettigrew et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:105,620
- Publication(s):Pettigrew et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 300 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 300 SVs from 61 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv3691236 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 88,963,494 | 88,963,494 | 89,061,013 | 89,069,113 |
esv3691236 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 88,696,662 | 88,696,662 | 88,794,181 | 88,802,281 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv16505543 | duplication | FR-18 | SNP array | SNP genotyping analysis | 38 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv16505543 | Remapped | Perfect | NC_000011.10:g.(88 963494_88963494)_( 89061013_89069113) dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 88,963,494 | 88,963,494 | 89,061,013 | 89,069,113 |
essv16505543 | Submitted genomic | NC_000011.9:g.(886 96662_88696662)_(8 8794181_88802281)d up97519 | GRCh37 (hg19) | NC_000011.9 | Chr11 | 88,696,662 | 88,696,662 | 88,794,181 | 88,802,281 |