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dbVar

Database of genomic structural variation

esv3691686

Organism: Homo sapiens

Study:estd220 (Pettigrew et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:93,505

Publication(s):Pettigrew et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 904 SVs from 69 studies. See in: genome view

Remapped(Score: Perfect):14,640,308-14,733,812

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3691686	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	14,640,308	14,649,799	14,733,811	14,733,812
esv3691686	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	14,620,954	14,630,445	14,714,457	14,714,458

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16505993	deletion	FR-33	SNP array	SNP genotyping analysis	40

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16505993	Remapped	Perfect	NC_000020.11:g.(14 640308_14649799)_( 14733811_14733812) del	GRCh38.p12	First Pass	NC_000020.11	Chr20	14,640,308	14,649,799	14,733,811	14,733,812
essv16505993	Submitted genomic		NC_000020.10:g.(14 620954_14630445)_( 14714457_14714458) del84012	GRCh37 (hg19)		NC_000020.10	Chr20	14,620,954	14,630,445	14,714,457	14,714,458

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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