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dbVar

Database of genomic structural variation

esv3758010

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:tandem duplication
Method Type:Curated
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:470,345

Description:
Chr10:g.(57345011_57345031)_(56874687_56874707)dup
Publication(s):Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1775 SVs from 93 studies. See in: genome view

Remapped(Score: Perfect):55,114,927-55,585,271

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3758010	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	55,114,927	55,114,947	55,585,251	55,585,271
esv3758010	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	56,874,687	56,874,707	57,345,011	57,345,031

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16581314	tandem duplication	2186064	Curated	Curated	675
essv16581315	tandem duplication	2196354	Curated	Curated	721

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16581314	Remapped	Perfect	NC_000010.11:g.(55 114927_55114947)_( 55585251_55585271) dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	55,114,927	55,114,947	55,585,251	55,585,271
essv16581315	Remapped	Perfect	NC_000010.11:g.(55 114927_55114947)_( 55585251_55585271) dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	55,114,927	55,114,947	55,585,251	55,585,271
essv16581314	Submitted genomic		NC_000010.10:g.(56 874687_56874707)_( 57345011_57345031) dup	GRCh37 (hg19)		NC_000010.10	Chr10	56,874,687	56,874,707	57,345,011	57,345,031
essv16581315	Submitted genomic		NC_000010.10:g.(56 874687_56874707)_( 57345011_57345031) dup	GRCh37 (hg19)		NC_000010.10	Chr10	56,874,687	56,874,707	57,345,011	57,345,031

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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