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dbVar

Database of genomic structural variation

esv3779513

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:complex chromosomal rearrangement
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,002

Description:Chr10:g.(89627664_89629664)_chr1:(160692788_16
0694788)bkpt
Publication(s):Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 97 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):160,722,998-160,724,998

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3779513	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	160,722,998	160,724,998	160,722,998	160,724,998
esv3779513	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	87,867,907	87,869,907	87,867,907	87,869,907
esv3779513	Remapped	Good	GRCh38.p12	PATCHES	Second Pass	NW_013171807.1	Chr10\|NW_0 13171807.1	83,730	83,730	85,731	85,731
esv3779513	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	160,692,788	160,694,788	160,692,788	160,694,788
esv3779513	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	89,627,664	89,629,664	89,627,664	89,629,664

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16605372	interchromosomal translocation	2120209	Curated	Curated	35

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
essv16605372	Remapped	Perfect	GRCh38.p12	First Pass	NC_000001.11	Chr1	160,722,998	160,724,998	160,722,998	160,724,998	not reported
essv16605372	Remapped	Good	GRCh38.p12	Second Pass	NW_013171807.1	Chr10\|NW_0 13171807.1	83,730	83,730	85,731	85,731	not reported
essv16605372	Remapped	Perfect	GRCh38.p12	First Pass	NC_000010.11	Chr10	87,867,907	87,869,907	87,867,907	87,869,907	not reported
essv16605372	Submitted genomic		GRCh37 (hg19)		NC_000001.10	Chr1	160,692,788	160,694,788	160,692,788	160,694,788	not reported
essv16605372	Submitted genomic		GRCh37 (hg19)		NC_000010.10	Chr10	89,627,664	89,629,664	89,627,664	89,629,664	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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