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dbVar

Database of genomic structural variation

esv3792794

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:complex chromosomal rearrangement
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:401

Description:chrX:g.o(81021293_81021693)_chrX:o(108692347_1
08692747)bkpt
Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 389 SVs from 23 studies. See in: genome view

Remapped(Score: Perfect):81,765,794-81,766,194

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
esv3792794	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	81,765,794	81,766,194	81,765,794	81,766,194	-
esv3792794	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	109,449,118	109,449,518	109,449,118	109,449,518	-
esv3792794	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	81,021,293	81,021,693	81,021,293	81,021,693	-
esv3792794	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	108,692,347	108,692,747	108,692,347	108,692,747	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16620039	intrachromosomal translocation	749713	Curated	Curated	63

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
essv16620039	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	81,765,794	81,766,194	81,765,794	81,766,194	-
essv16620039	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	109,449,118	109,449,518	109,449,118	109,449,518	-
essv16620039	Submitted genomic		GRCh37 (hg19)		NC_000023.10	ChrX	81,021,293	81,021,693	81,021,293	81,021,693	-
essv16620039	Submitted genomic		GRCh37 (hg19)		NC_000023.10	ChrX	108,692,347	108,692,747	108,692,347	108,692,747	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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