esv3794227
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:Chr6:g.(110917733_110918133)_chr6:o(115525611_
115526011)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 100 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 111 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 100 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 111 SVs from 27 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|---|
esv3794227 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 110,596,530 | 110,596,930 | 110,596,530 | 110,596,930 | |
esv3794227 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 115,204,447 | 115,204,847 | 115,204,447 | 115,204,847 | - |
esv3794227 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 110,917,733 | 110,918,133 | 110,917,733 | 110,918,133 | |||
esv3794227 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 115,525,611 | 115,526,011 | 115,525,611 | 115,526,011 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv16621632 | intrachromosomal translocation | 1126084 | Curated | Curated | 246 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|
essv16621632 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 110,596,530 | 110,596,930 | 110,596,530 | 110,596,930 | not reported |
essv16621632 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 115,204,447 | 115,204,847 | 115,204,447 | 115,204,847 | - |
essv16621632 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 110,917,733 | 110,918,133 | 110,917,733 | 110,918,133 | not reported | ||
essv16621632 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 115,525,611 | 115,526,011 | 115,525,611 | 115,526,011 | - |