esv3800420
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,001
- Description:
Chr12:g.(4324135_4326135)_chr17:o(29260692_29262692)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 165 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 165 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3800420 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 4,214,969 | 4,216,969 | 4,214,969 | 4,216,969 | |
| esv3800420 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 30,933,674 | 30,935,674 | 30,933,674 | 30,935,674 | - |
| esv3800420 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 4,324,135 | 4,326,135 | 4,324,135 | 4,326,135 | |||
| esv3800420 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 29,260,692 | 29,262,692 | 29,260,692 | 29,262,692 | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16628566 | interchromosomal translocation | 2120211 | Curated | Curated | 26 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16628566 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 4,214,969 | 4,216,969 | 4,214,969 | 4,216,969 | not reported |
| essv16628566 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 30,933,674 | 30,935,674 | 30,933,674 | 30,935,674 | - |
| essv16628566 | Submitted genomic | GRCh37 (hg19) | NC_000012.11 | Chr12 | 4,324,135 | 4,326,135 | 4,324,135 | 4,326,135 | not reported | ||
| essv16628566 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 29,260,692 | 29,262,692 | 29,260,692 | 29,262,692 | - |