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dbVar

Database of genomic structural variation

esv3801001

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:486,701

Description:
Chr11:g.(78376891_78376911)_(78863571_78863591)del
Publication(s):Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 952 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):78,665,846-79,152,546

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3801001	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	78,665,846	78,665,866	79,152,526	79,152,546
esv3801001	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	78,376,891	78,376,911	78,863,571	78,863,591

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16629301	deletion	2196342	Curated	Curated	190
essv16629302	deletion	2186508	Curated	Curated	257

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16629301	Remapped	Perfect	NC_000011.10:g.(78 665846_78665866)_( 79152526_79152546) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	78,665,846	78,665,866	79,152,526	79,152,546
essv16629302	Remapped	Perfect	NC_000011.10:g.(78 665846_78665866)_( 79152526_79152546) del	GRCh38.p12	First Pass	NC_000011.10	Chr11	78,665,846	78,665,866	79,152,526	79,152,546
essv16629301	Submitted genomic		NC_000011.9:g.(783 76891_78376911)_(7 8863571_78863591)d el	GRCh37 (hg19)		NC_000011.9	Chr11	78,376,891	78,376,911	78,863,571	78,863,591
essv16629302	Submitted genomic		NC_000011.9:g.(783 76891_78376911)_(7 8863571_78863591)d el	GRCh37 (hg19)		NC_000011.9	Chr11	78,376,891	78,376,911	78,863,571	78,863,591

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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