esv3803141
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:702,826
- Description:
Chr4:g.(125672816_125672836)_(126375621_126375641)del - Publication(s):Forbes et al. 2008, Forbes et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1801 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 1801 SVs from 85 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv3803141 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 124,751,661 | 124,751,681 | 125,454,466 | 125,454,486 |
esv3803141 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 125,672,816 | 125,672,836 | 126,375,621 | 126,375,641 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv16631597 | deletion | 2197223 | Curated | Curated | 122 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv16631597 | Remapped | Perfect | NC_000004.12:g.(12 4751661_124751681) _(125454466_125454 486)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 124,751,661 | 124,751,681 | 125,454,466 | 125,454,486 |
essv16631597 | Submitted genomic | NC_000004.11:g.(12 5672816_125672836) _(126375621_126375 641)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 125,672,816 | 125,672,836 | 126,375,621 | 126,375,641 |