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dbVar

Database of genomic structural variation

esv3804672

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:tandem duplication
Method Type:Curated
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:61,026

Description:Chr2:g.o25872525inschr2:o25933550_o25933510_ch
r2:o25935621bkpt
Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 319 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):25,649,656-25,710,681

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3804672	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	25,649,656	25,710,681
esv3804672	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	25,710,641	25,712,752
esv3804672	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	25,872,525	25,933,550
esv3804672	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	25,933,510	25,935,621

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16580384	intrachromosomal translocation	749712	Curated	Curated	157
essv16607982	intrachromosomal translocation	749712	Curated	Curated	157

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
essv16580384	Remapped	Perfect	GRCh38.p12	First Pass	NC_000002.12	Chr2	25,649,656	25,649,656	-
essv16607982	Remapped	Perfect	GRCh38.p12	First Pass	NC_000002.12	Chr2	25,710,641	25,710,641	-
essv16580384	Submitted genomic		GRCh37 (hg19)		NC_000002.11	Chr2	25,872,525	25,872,525	-
essv16607982	Submitted genomic		GRCh37 (hg19)		NC_000002.11	Chr2	25,933,510	25,933,510	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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