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dbVar

Database of genomic structural variation

esv3805816

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:complex chromosomal rearrangement
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,001

Description:Chr5:g.o(112703097_112705097)_chr22:(28082501_
28084501)bkpt
Publication(s):Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 118 SVs from 24 studies. See in: genome view

Remapped(Score: Perfect):113,367,400-113,369,400

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
esv3805816	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	113,367,400	113,369,400	113,367,400	113,369,400	-
esv3805816	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	27,686,504	27,688,504	27,686,504	27,688,504
esv3805816	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	112,703,097	112,705,097	112,703,097	112,705,097	-
esv3805816	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000022.10	Chr22	28,082,501	28,084,501	28,082,501	28,084,501

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16634581	interchromosomal translocation	2120204	Curated	Curated	39

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop	strand
essv16634581	Remapped	Perfect	GRCh38.p12	First Pass	NC_000005.10	Chr5	113,367,400	113,369,400	113,367,400	113,369,400	-
essv16634581	Remapped	Perfect	GRCh38.p12	First Pass	NC_000022.11	Chr22	27,686,504	27,688,504	27,686,504	27,688,504	not reported
essv16634581	Submitted genomic		GRCh37 (hg19)		NC_000005.9	Chr5	112,703,097	112,705,097	112,703,097	112,705,097	-
essv16634581	Submitted genomic		GRCh37 (hg19)		NC_000022.10	Chr22	28,082,501	28,084,501	28,082,501	28,084,501	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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