esv3808852
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:Chr17:g.o(29939015_29939415)_chr17:o(40747348_
40747748)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 146 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 146 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 45 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3808852 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 31,611,996 | 31,612,396 | 31,611,996 | 31,612,396 | - |
| esv3808852 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 42,595,330 | 42,595,730 | 42,595,330 | 42,595,730 | - |
| esv3808852 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 29,939,015 | 29,939,415 | 29,939,015 | 29,939,415 | - | ||
| esv3808852 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 40,747,348 | 40,747,748 | 40,747,348 | 40,747,748 | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16637964 | intrachromosomal translocation | 1126506 | Curated | Curated | 96 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16637964 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 31,611,996 | 31,612,396 | 31,611,996 | 31,612,396 | - |
| essv16637964 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 42,595,330 | 42,595,730 | 42,595,330 | 42,595,730 | - |
| essv16637964 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 29,939,015 | 29,939,415 | 29,939,015 | 29,939,415 | - | ||
| essv16637964 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 40,747,348 | 40,747,748 | 40,747,348 | 40,747,748 | - |