esv3811280
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:Chr17:g.o(37918730_37919130)_chr17:o(38005569_
38005969)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 40 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 38 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 49 SVs from 20 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|---|
esv3811280 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 39,762,477 | 39,762,877 | 39,762,477 | 39,762,877 | - |
esv3811280 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 39,849,316 | 39,849,716 | 39,849,316 | 39,849,716 | - |
esv3811280 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 37,918,730 | 37,919,130 | 37,918,730 | 37,919,130 | - | ||
esv3811280 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 38,005,569 | 38,005,969 | 38,005,569 | 38,005,969 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv16640699 | intrachromosomal translocation | 749709 | Curated | Curated | 261 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|---|
essv16640699 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 39,762,477 | 39,762,877 | 39,762,477 | 39,762,877 | - |
essv16640699 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 39,849,316 | 39,849,716 | 39,849,316 | 39,849,716 | - |
essv16640699 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 37,918,730 | 37,919,130 | 37,918,730 | 37,919,130 | - | ||
essv16640699 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 38,005,569 | 38,005,969 | 38,005,569 | 38,005,969 | - |