esv3813594
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401
- Description:Chr19:g.o(39626289_39626689)_chr19:(39635377_3
9635777)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 58 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 52 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 58 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 52 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3813594 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 39,135,649 | 39,136,049 | 39,135,649 | 39,136,049 | - |
| esv3813594 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 39,144,737 | 39,145,137 | 39,144,737 | 39,145,137 | |
| esv3813594 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 39,626,289 | 39,626,689 | 39,626,289 | 39,626,689 | - | ||
| esv3813594 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 39,635,377 | 39,635,777 | 39,635,377 | 39,635,777 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16643288 | intrachromosomal translocation | 1126514 | Curated | Curated | 89 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16643288 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 39,135,649 | 39,136,049 | 39,135,649 | 39,136,049 | - |
| essv16643288 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 39,144,737 | 39,145,137 | 39,144,737 | 39,145,137 | not reported |
| essv16643288 | Submitted genomic | GRCh37 (hg19) | NC_000019.9 | Chr19 | 39,626,289 | 39,626,689 | 39,626,289 | 39,626,689 | - | ||
| essv16643288 | Submitted genomic | GRCh37 (hg19) | NC_000019.9 | Chr19 | 39,635,377 | 39,635,777 | 39,635,377 | 39,635,777 | not reported |