esv3814005
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,001
- Description:
Chr16:g.(68166410_68168410)_chr5:o(44137789_44139789)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 69 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3814005 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 44,137,687 | 44,139,687 | 44,137,687 | 44,139,687 | - |
| esv3814005 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 68,132,507 | 68,134,507 | 68,132,507 | 68,134,507 | |
| esv3814005 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 44,137,789 | 44,139,789 | 44,137,789 | 44,139,789 | - | ||
| esv3814005 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 68,166,410 | 68,168,410 | 68,166,410 | 68,168,410 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16643745 | interchromosomal translocation | 2120207 | Curated | Curated | 15 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16643745 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 44,137,687 | 44,139,687 | 44,137,687 | 44,139,687 | - |
| essv16643745 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 68,132,507 | 68,134,507 | 68,132,507 | 68,134,507 | not reported |
| essv16643745 | Submitted genomic | GRCh37 (hg19) | NC_000005.9 | Chr5 | 44,137,789 | 44,139,789 | 44,137,789 | 44,139,789 | - | ||
| essv16643745 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 68,166,410 | 68,168,410 | 68,166,410 | 68,168,410 | not reported |