esv3814083
- Organism: Homo sapiens
- Study:estd192 (COSMIC)
- Variant Type:complex chromosomal rearrangement
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,001
- Description:Chr1:g.(59204191_59206191)_chr13:(103828302_10
3830302)bkpt - Publication(s):Forbes et al. 2008, Forbes et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 75 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 230 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 75 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 230 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3814083 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 58,738,519 | 58,740,519 | 58,738,519 | 58,740,519 |
| esv3814083 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 103,175,952 | 103,177,952 | 103,175,952 | 103,177,952 |
| esv3814083 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 59,204,191 | 59,206,191 | 59,204,191 | 59,206,191 | ||
| esv3814083 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 103,828,302 | 103,830,302 | 103,828,302 | 103,830,302 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv16643839 | interchromosomal translocation | 2120213 | Curated | Curated | 34 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv16643839 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 58,738,519 | 58,740,519 | 58,738,519 | 58,740,519 | not reported |
| essv16643839 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 103,175,952 | 103,177,952 | 103,175,952 | 103,177,952 | not reported |
| essv16643839 | Submitted genomic | GRCh37 (hg19) | NC_000001.10 | Chr1 | 59,204,191 | 59,206,191 | 59,204,191 | 59,206,191 | not reported | ||
| essv16643839 | Submitted genomic | GRCh37 (hg19) | NC_000013.10 | Chr13 | 103,828,302 | 103,830,302 | 103,828,302 | 103,830,302 | not reported |