esv3817285
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:delins
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:28
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 410 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 409 SVs from 19 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
esv3817285 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
esv3817285 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
essv16846007 | delins | SAMN01036848 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,751 |
essv16846008 | delins | SAMN00249784 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,593 |
essv16846009 | delins | SAMN00263057 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,791 |
essv16846010 | delins | SAMN00779973 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,196 |
essv16846011 | delins | SAMN01036713 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,109 |
essv16846012 | delins | SAMN01036719 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,186 |
essv16846013 | delins | SAMN01036724 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,138 |
essv16846014 | delins | SAMN01090870 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,187 |
essv16846015 | delins | SAMN01090924 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,729 |
essv16846016 | delins | SAMN01761240 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,309 |
essv16846017 | delins | SAMN01036816 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,086 |
essv16846018 | delins | SAMN01036821 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,308 |
essv16846019 | delins | SAMN01761247 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,183 |
essv16846020 | delins | SAMN01090912 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,725 |
essv16846021 | delins | SAMN01761350 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,677 |
essv16846022 | delins | SAMN01091004 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,722 |
essv16846023 | delins | SAMN01090994 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,826 |
essv16846024 | delins | SAMN01096765 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,584 |
essv16846025 | delins | SAMN01761533 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,194 |
essv16846026 | delins | SAMN00001616 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,760 |
essv16846027 | delins | SAMN00000466 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,613 |
essv16846028 | delins | SAMN00001019 | Sequencing | Read depth and paired-end mapping | Heterozygous | 3,288 |
essv16846029 | delins | SAMN00001683 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,908 |
essv16846030 | delins | SAMN00001689 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,573 |
essv16846031 | delins | SAMN00001106 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,434 |
essv16846032 | delins | SAMN00001115 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,431 |
essv16846033 | delins | SAMN00007764 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,094 |
essv16846034 | delins | SAMN00007915 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,584 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
essv16846007 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846008 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846009 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846010 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846011 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846012 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846013 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846014 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846015 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846016 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846017 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846018 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846019 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846020 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846021 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846022 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846023 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846024 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846025 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846026 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846027 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846028 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846029 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846030 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846031 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846032 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846033 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846034 | Remapped | Perfect | NC_000023.11:g.101 690874delins58 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,690,874 | 101,690,874 |
essv16846007 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846008 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846009 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846010 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846011 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846012 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846013 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846014 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846015 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846016 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846017 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846018 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846019 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846020 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846021 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846022 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846023 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846024 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846025 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846026 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846027 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846028 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846029 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846030 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846031 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846032 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846033 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 | ||
essv16846034 | Submitted genomic | NC_000023.10:g.100 945847delinsATATGT ATATATACATAAATATTA TATATATGTATATATACA TAAATATTATACATAC | GRCh37 (hg19) | NC_000023.10 | ChrX | 100,945,847 | 100,945,847 |