esv3817848

Organism: Homo sapiens

Study:estd214 (1000 Genomes Consortium Phase 3)
Variant Type:delins
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:41
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):1000 Genomes Project Consortium et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 415 SVs from 25 studies. See in: genome view

Remapped(Score: Perfect):112,160,838-112,160,838

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3817848	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
esv3817848	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	111,404,066	111,404,066

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv16930092	delins	SAMN00009199	Sequencing	Read depth and paired-end mapping	Heterozygous	2,710
essv16930093	delins	SAMN00009202	Sequencing	Read depth and paired-end mapping	Heterozygous	2,753
essv16930094	delins	SAMN00014426	Sequencing	Read depth and paired-end mapping	Heterozygous	2,577
essv16930095	delins	SAMN00630194	Sequencing	Read depth and paired-end mapping	Heterozygous	3,187
essv16930096	delins	SAMN00262980	Sequencing	Read depth and paired-end mapping	Heterozygous	2,988
essv16930097	delins	SAMN00630223	Sequencing	Read depth and paired-end mapping	Heterozygous	3,177
essv16930098	delins	SAMN00630229	Sequencing	Read depth and paired-end mapping	Heterozygous	3,223
essv16930099	delins	SAMN01091044	Sequencing	Read depth and paired-end mapping	Heterozygous	2,852
essv16930100	delins	SAMN01091046	Sequencing	Read depth and paired-end mapping	Heterozygous	3,078
essv16930101	delins	SAMN00630250	Sequencing	Read depth and paired-end mapping	Heterozygous	2,763
essv16930102	delins	SAMN00779949	Sequencing	Read depth and paired-end mapping	Heterozygous	3,105
essv16930103	delins	SAMN00779979	Sequencing	Read depth and paired-end mapping	Heterozygous	3,212
essv16930104	delins	SAMN00779982	Sequencing	Read depth and paired-end mapping	Heterozygous	3,199
essv16930105	delins	SAMN01036709	Sequencing	Read depth and paired-end mapping	Heterozygous	3,156
essv16930106	delins	SAMN01036710	Sequencing	Read depth and paired-end mapping	Heterozygous	3,268
essv16930107	delins	SAMN01036718	Sequencing	Read depth and paired-end mapping	Heterozygous	3,203
essv16930108	delins	SAMN01036719	Sequencing	Read depth and paired-end mapping	Heterozygous	3,186
essv16930109	delins	SAMN01036721	Sequencing	Read depth and paired-end mapping	Heterozygous	3,162
essv16930110	delins	SAMN01090761	Sequencing	Read depth and paired-end mapping	Heterozygous	2,929
essv16930111	delins	SAMN01036734	Sequencing	Read depth and paired-end mapping	Heterozygous	2,930
essv16930112	delins	SAMN01761223	Sequencing	Read depth and paired-end mapping	Heterozygous	3,331
essv16930113	delins	SAMN01036740	Sequencing	Read depth and paired-end mapping	Homozygous	3,019
essv16930114	delins	SAMN01036775	Sequencing	Read depth and paired-end mapping	Heterozygous	3,028
essv16930115	delins	SAMN01036743	Sequencing	Read depth and paired-end mapping	Homozygous	2,892
essv16930116	delins	SAMN01090749	Sequencing	Read depth and paired-end mapping	Heterozygous	3,026
essv16930117	delins	SAMN01036782	Sequencing	Read depth and paired-end mapping	Heterozygous	3,182
essv16930118	delins	SAMN01090800	Sequencing	Read depth and paired-end mapping	Heterozygous	3,037
essv16930119	delins	SAMN01036789	Sequencing	Read depth and paired-end mapping	Heterozygous	3,228
essv16930120	delins	SAMN01761353	Sequencing	Read depth and paired-end mapping	Heterozygous	3,438
essv16930121	delins	SAMN01090757	Sequencing	Read depth and paired-end mapping	Heterozygous	3,011
essv16930122	delins	SAMN00001020	Sequencing	Read depth and paired-end mapping	Heterozygous	3,239
essv16930123	delins	SAMN00001053	Sequencing	Read depth and paired-end mapping	Heterozygous	2,754
essv16930124	delins	SAMN00000565	Sequencing	Read depth and paired-end mapping	Heterozygous	3,208
essv16930125	delins	SAMN00001116	Sequencing	Read depth and paired-end mapping	Heterozygous	2,503
essv16930126	delins	SAMN00001118	Sequencing	Read depth and paired-end mapping	Heterozygous	3,097
essv16930127	delins	SAMN00001127	Sequencing	Read depth and paired-end mapping	Heterozygous	3,174
essv16930128	delins	SAMN00007814	Sequencing	Read depth and paired-end mapping	Heterozygous	3,114
essv16930129	delins	SAMN00007839	Sequencing	Read depth and paired-end mapping	Heterozygous	2,433
essv16930130	delins	SAMN00007858	Sequencing	Read depth and paired-end mapping	Heterozygous	2,476
essv16930131	delins	SAMN00006627	Sequencing	Read depth and paired-end mapping	Heterozygous	3,033
essv16930132	delins	SAMN00007876	Sequencing	Read depth and paired-end mapping	Heterozygous	3,092

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv16930092	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930093	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930094	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930095	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930096	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930097	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930098	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930099	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930100	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930101	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930102	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930103	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930104	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930105	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930106	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930107	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930108	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930109	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930110	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930111	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930112	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930113	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930114	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930115	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930116	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930117	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930118	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930119	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930120	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930121	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930122	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930123	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930124	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930125	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930126	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930127	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930128	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930129	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930130	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930131	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930132	Remapped	Perfect	NC_000023.11:g.112 160838delins?	GRCh38.p12	First Pass	NC_000023.11	ChrX	112,160,838	112,160,838
essv16930092	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930093	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930094	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930095	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930096	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930097	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930098	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930099	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930100	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930101	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930102	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930103	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930104	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930105	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930106	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930107	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930108	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930109	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930110	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930111	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930112	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930113	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930114	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930115	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930116	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930117	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930118	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930119	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930120	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930121	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930122	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930123	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930124	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930125	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930126	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930127	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930128	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930129	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930130	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930131	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066
essv16930132	Submitted genomic		NC_000023.10:g.111 404066delins?	GRCh37 (hg19)		NC_000023.10	ChrX	111,404,066	111,404,066

dbVar

Database of genomic structural variation

esv3817848

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.