esv3902201
- Organism: Homo sapiens
- Study:estd225 (Magnusson et al. 2016)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:299,471
- Publication(s):Magnusson et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1251 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 1251 SVs from 81 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3902201 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 125,732,069 | 126,031,539 |
| esv3902201 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 125,372,123 | 125,671,593 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| essv25821286 | copy number loss | SNP array | SNP genotyping analysis | 1 |
| essv25821287 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv25821286 | Remapped | Perfect | NC_000007.14:g.125 732069_126031539de l | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 125,732,069 | 126,031,539 |
| essv25821287 | Remapped | Perfect | NC_000007.14:g.125 732069_126031539de l | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 125,732,069 | 126,031,539 |
| essv25821286 | Submitted genomic | NC_000007.13:g.125 372123_125671593de l | GRCh37 (hg19) | NC_000007.13 | Chr7 | 125,372,123 | 125,671,593 | ||
| essv25821287 | Submitted genomic | NC_000007.13:g.125 372123_125671593de l | GRCh37 (hg19) | NC_000007.13 | Chr7 | 125,372,123 | 125,671,593 |