esv3990346
- Organism: Homo sapiens
- Study:estd218 (Simpson et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:75,964
- Publication(s):Simpson et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1301 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 1303 SVs from 89 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3990346 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 559,714 | 635,677 |
| esv3990346 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 559,714 | 635,677 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|
| essv26047367 | copy number gain | SLI_87_2 | SNP array | Probe signal intensity | Specific language impairment 1 | 3 | 11 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv26047367 | Remapped | Perfect | NC_000009.12:g.(?_ 559714)_(635677_?) dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 559,714 | 635,677 |
| essv26047367 | Submitted genomic | NC_000009.11:g.(?_ 559714)_(635677_?) dup | GRCh37 (hg19) | NC_000009.11 | Chr9 | 559,714 | 635,677 |