esv3991188
- Organism: Homo sapiens
- Study:estd218 (Simpson et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:138,887
- Publication(s):Simpson et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1376 SVs from 103 studies. See in: genome view
Overlapping variant regions from other studies: 1376 SVs from 103 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3991188 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 135,257,320 | 135,396,206 |
| esv3991188 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 138,149,166 | 138,288,052 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|
| essv26048126 | copy number gain | SLI_115_5 | SNP array | Probe signal intensity | Specific language impairment 1 | 3 | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv26048126 | Remapped | Perfect | NC_000009.12:g.(?_ 135257320)_(135396 206_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 135,257,320 | 135,396,206 |
| essv26048126 | Submitted genomic | NC_000009.11:g.(?_ 138149166)_(138288 052_?)dup | GRCh37 (hg19) | NC_000009.11 | Chr9 | 138,149,166 | 138,288,052 |