esv3994768
- Organism: Homo sapiens
- Study:estd218 (Simpson et al. 2015)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:67,817
- Publication(s):Simpson et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 702 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 702 SVs from 78 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3994768 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 111,031,119 | 111,098,935 |
| esv3994768 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 111,683,466 | 111,751,282 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|
| essv26051347 | copy number gain | SLI_103_3 | SNP array | Probe signal intensity | Specific language impairment 1 | 3 | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv26051347 | Remapped | Perfect | NC_000013.11:g.(?_ 111031119)_(111098 935_?)dup | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 111,031,119 | 111,098,935 |
| essv26051347 | Submitted genomic | NC_000013.10:g.(?_ 111683466)_(111751 282_?)dup | GRCh37 (hg19) | NC_000013.10 | Chr13 | 111,683,466 | 111,751,282 |