esv4010502
- Organism: Homo sapiens
- Study:estd233 (Luo et al. 2017b)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:132,001
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 707 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 707 SVs from 61 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv4010502 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 63,158,767 | 63,290,767 |
| esv4010502 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 60,826,000 | 60,958,000 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| essv26066509 | copy number gain | hepG2 | Sequencing | Read depth and paired-end mapping | 3 | 1,026 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv26066509 | Remapped | Perfect | NC_000018.10:g.631 58767_63290767dup | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 63,158,767 | 63,290,767 |
| essv26066509 | Submitted genomic | NC_000018.9:g.6082 6000_60958000dup13 2000 | GRCh37 (hg19) | NC_000018.9 | Chr18 | 60,826,000 | 60,958,000 |