esv5172
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,435
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 202 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 202 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 39 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv5172 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 144,026,464 | 144,029,898 |
| esv5172 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 143,406,029 | 143,409,463 |
| esv5172 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 143,386,222 | 143,389,656 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv27613 | inversion | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv27613 | Remapped | Perfect | NC_000005.10:g.(14 4026464_?)_(?_1440 29898)inv | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 144,026,464 | 144,029,898 |
| essv27613 | Remapped | Perfect | NC_000005.9:g.(143 406029_?)_(?_14340 9463)inv | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 143,406,029 | 143,409,463 |
| essv27613 | Submitted genomic | NC_000005.8:g.(143 386222_?)_(?_14338 9656)inv | NCBI36 (hg18) | NC_000005.8 | Chr5 | 143,386,222 | 143,389,656 |