esv5233
- Organism: Homo sapiens
- Study:estd3 (Wang et al. 2008)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:158,294
- Publication(s):Wang et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 819 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 819 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 244 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv5233 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 23,101,225 | 23,259,518 |
| esv5233 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 23,284,027 | 23,442,320 |
| esv5233 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 23,075,867 | 23,234,160 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv27674 | inversion | YH | Sequencing | Read depth and paired-end mapping | 2,682 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv27674 | Remapped | Perfect | NC_000019.10:g.(23 101225_?)_(?_23259 518)inv | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 23,101,225 | 23,259,518 |
| essv27674 | Remapped | Perfect | NC_000019.9:g.(232 84027_?)_(?_234423 20)inv | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 23,284,027 | 23,442,320 |
| essv27674 | Submitted genomic | NC_000019.8:g.(230 75867_?)_(?_232341 60)inv | NCBI36 (hg18) | NC_000019.8 | Chr19 | 23,075,867 | 23,234,160 |