esv5748
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:60,782
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 526 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 526 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 160 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv5748 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 33,892,561 | 33,892,897 | 33,953,251 | 33,953,342 |
| esv5748 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 34,184,762 | 34,185,098 | 34,245,452 | 34,245,543 |
| esv5748 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 31,972,054 | 31,972,390 | 32,032,744 | 32,032,835 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv28189 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv28189 | Remapped | Perfect | NC_000015.10:g.(33 892561_33892897)_( 33953251_33953342) inv | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 33,892,561 | 33,892,897 | 33,953,251 | 33,953,342 |
| essv28189 | Remapped | Perfect | NC_000015.9:g.(341 84762_34185098)_(3 4245452_34245543)i nv | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 34,184,762 | 34,185,098 | 34,245,452 | 34,245,543 |
| essv28189 | Submitted genomic | NC_000015.8:g.(319 72054_31972390)_(3 2032744_32032835)i nv | NCBI36 (hg18) | NC_000015.8 | Chr15 | 31,972,054 | 31,972,390 | 32,032,744 | 32,032,835 |