esv6291
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,995
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 301 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 301 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 169 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv6291 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 125,905,809 | 125,905,932 | 125,919,711 | 125,919,803 |
| esv6291 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 127,594,378 | 127,594,501 | 127,608,280 | 127,608,372 |
| esv6291 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 127,584,368 | 127,584,491 | 127,598,270 | 127,598,362 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv28732 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv28732 | Remapped | Perfect | NC_000010.11:g.(12 5905809_125905932) _(125919711_125919 803)inv | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 125,905,809 | 125,905,932 | 125,919,711 | 125,919,803 |
| essv28732 | Remapped | Perfect | NC_000010.10:g.(12 7594378_127594501) _(127608280_127608 372)inv | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 127,594,378 | 127,594,501 | 127,608,280 | 127,608,372 |
| essv28732 | Submitted genomic | NC_000010.9:g.(127 584368_127584491)_ (127598270_1275983 62)inv | NCBI36 (hg18) | NC_000010.9 | Chr10 | 127,584,368 | 127,584,491 | 127,598,270 | 127,598,362 |