esv6503
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:46,754
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 415 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 432 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv6503 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 44,410,960 | 44,410,960 | 44,457,713 | 44,457,713 |
| esv6503 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 44,915,126 | 44,915,769 | 44,961,423 | 44,961,926 |
| esv6503 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 49,606,966 | 49,607,609 | 49,653,263 | 49,653,766 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv28944 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv28944 | Remapped | Good | NC_000019.10:g.(44 410960_44410960)_( 44457713_44457713) inv | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 44,410,960 | 44,410,960 | 44,457,713 | 44,457,713 |
| essv28944 | Remapped | Perfect | NC_000019.9:g.(449 15126_44915769)_(4 4961423_44961926)i nv | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 44,915,126 | 44,915,769 | 44,961,423 | 44,961,926 |
| essv28944 | Submitted genomic | NC_000019.8:g.(496 06966_49607609)_(4 9653263_49653766)i nv | NCBI36 (hg18) | NC_000019.8 | Chr19 | 49,606,966 | 49,607,609 | 49,653,263 | 49,653,766 |