esv7170
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,544
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 162 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 162 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv7170 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 23,776,082 | 23,776,220 | 23,798,189 | 23,798,625 |
| esv7170 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 23,815,701 | 23,815,839 | 23,837,808 | 23,838,244 |
| esv7170 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 23,782,226 | 23,782,364 | 23,804,333 | 23,804,769 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv29611 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv29611 | Remapped | Perfect | NC_000007.14:g.(23 776082_23776220)_( 23798189_23798625) inv | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 23,776,082 | 23,776,220 | 23,798,189 | 23,798,625 |
| essv29611 | Remapped | Perfect | NC_000007.13:g.(23 815701_23815839)_( 23837808_23838244) inv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 23,815,701 | 23,815,839 | 23,837,808 | 23,838,244 |
| essv29611 | Submitted genomic | NC_000007.12:g.(23 782226_23782364)_( 23804333_23804769) inv | NCBI36 (hg18) | NC_000007.12 | Chr7 | 23,782,226 | 23,782,364 | 23,804,333 | 23,804,769 |