esv7472
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:27,573
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 188 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 67 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv7472 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 93,328,576 | 93,328,634 | 93,355,619 | 93,356,148 |
| esv7472 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 96,090,858 | 96,090,916 | 96,117,901 | 96,118,430 |
| esv7472 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 95,130,679 | 95,130,737 | 95,157,722 | 95,158,251 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv29913 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv29913 | Remapped | Perfect | NC_000009.12:g.(93 328576_93328634)_( 93355619_93356148) inv | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 93,328,576 | 93,328,634 | 93,355,619 | 93,356,148 |
| essv29913 | Remapped | Perfect | NC_000009.11:g.(96 090858_96090916)_( 96117901_96118430) inv | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 96,090,858 | 96,090,916 | 96,117,901 | 96,118,430 |
| essv29913 | Submitted genomic | NC_000009.10:g.(95 130679_95130737)_( 95157722_95158251) inv | NCBI36 (hg18) | NC_000009.10 | Chr9 | 95,130,679 | 95,130,737 | 95,157,722 | 95,158,251 |