esv8318
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:36,793
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2302 SVs from 99 studies. See in: genome view
Overlapping variant regions from other studies: 1888 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 1141 SVs from 32 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv8318 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 46,489,729 | 46,489,729 | 46,526,521 | 46,526,521 |
esv8318 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 47,023,096 | 47,023,337 | 47,059,578 | 47,059,708 |
esv8318 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 46,443,102 | 46,443,343 | 46,479,584 | 46,479,714 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
essv30759 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv30759 | Remapped | Good | NC_000010.11:g.(46 489729_46489729)_( 46526521_46526521) inv | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,489,729 | 46,489,729 | 46,526,521 | 46,526,521 |
essv30759 | Remapped | Perfect | NC_000010.10:g.(47 023096_47023337)_( 47059578_47059708) inv | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 47,023,096 | 47,023,337 | 47,059,578 | 47,059,708 |
essv30759 | Submitted genomic | NC_000010.9:g.(464 43102_46443343)_(4 6479584_46479714)i nv | NCBI36 (hg18) | NC_000010.9 | Chr10 | 46,443,102 | 46,443,343 | 46,479,584 | 46,479,714 |