esv9380
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:24,875
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 246 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 246 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv9380 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 6,994,784 | 6,995,252 | 7,019,570 | 7,019,658 |
| esv9380 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 7,036,471 | 7,036,939 | 7,061,257 | 7,061,345 |
| esv9380 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 7,011,471 | 7,011,939 | 7,036,257 | 7,036,345 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv31821 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv31821 | Remapped | Perfect | NC_000003.12:g.(69 94784_6995252)_(70 19570_7019658)inv | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 6,994,784 | 6,995,252 | 7,019,570 | 7,019,658 |
| essv31821 | Remapped | Perfect | NC_000003.11:g.(70 36471_7036939)_(70 61257_7061345)inv | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 7,036,471 | 7,036,939 | 7,061,257 | 7,061,345 |
| essv31821 | Submitted genomic | NC_000003.10:g.(70 11471_7011939)_(70 36257_7036345)inv | NCBI36 (hg18) | NC_000003.10 | Chr3 | 7,011,471 | 7,011,939 | 7,036,257 | 7,036,345 |