esv9496
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,275
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 139 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 139 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 30 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv9496 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 36,563,899 | 36,563,976 | 36,579,056 | 36,579,173 |
| esv9496 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 36,565,521 | 36,565,598 | 36,580,678 | 36,580,795 |
| esv9496 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 36,241,916 | 36,241,993 | 36,257,073 | 36,257,190 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv31937 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv31937 | Remapped | Perfect | NC_000004.12:g.(36 563899_36563976)_( 36579056_36579173) inv | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 36,563,899 | 36,563,976 | 36,579,056 | 36,579,173 |
| essv31937 | Remapped | Perfect | NC_000004.11:g.(36 565521_36565598)_( 36580678_36580795) inv | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 36,565,521 | 36,565,598 | 36,580,678 | 36,580,795 |
| essv31937 | Submitted genomic | NC_000004.10:g.(36 241916_36241993)_( 36257073_36257190) inv | NCBI36 (hg18) | NC_000004.10 | Chr4 | 36,241,916 | 36,241,993 | 36,257,073 | 36,257,190 |