esv9606
- Organism: Homo sapiens
- Study:estd19 (Ahn et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,836
- Publication(s):Ahn et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 601 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 601 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 358 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv9606 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 18,556,182 | 18,556,477 | 18,569,930 | 18,570,017 |
| esv9606 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 18,845,111 | 18,845,406 | 18,858,859 | 18,858,946 |
| esv9606 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 18,885,117 | 18,885,412 | 18,898,865 | 18,898,952 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv32047 | inversion | Sequencing | Read depth and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv32047 | Remapped | Perfect | NC_000010.11:g.(18 556182_18556477)_( 18569930_18570017) inv | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 18,556,182 | 18,556,477 | 18,569,930 | 18,570,017 |
| essv32047 | Remapped | Perfect | NC_000010.10:g.(18 845111_18845406)_( 18858859_18858946) inv | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 18,845,111 | 18,845,406 | 18,858,859 | 18,858,946 |
| essv32047 | Submitted genomic | NC_000010.9:g.(188 85117_18885412)_(1 8898865_18898952)i nv | NCBI36 (hg18) | NC_000010.9 | Chr10 | 18,885,117 | 18,885,412 | 18,898,865 | 18,898,952 |