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dbVar

Database of genomic structural variation

esv989763

Organism: Homo sapiens

Study:estd180 (Pang et al. 2010)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:25,936

Publication(s):Pang et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 372 SVs from 71 studies. See in: genome view

Remapped(Score: Pass):133,296,205-133,322,140

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
esv989763	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	133,296,205	133,322,140
esv989763	Remapped	Pass	GRCh38.p12	PATCHES	Second Pass	NW_009646201.1	Chr9\|NW_00 9646201.1	122,299	148,234
esv989763	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	136,171,778	136,188,976
esv989763	Remapped	Pass	GRCh37.p13	PATCHES	Second Pass	NW_003315925.1	Chr9\|NW_00 3315925.1	122,299	148,234
esv989763	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000009.10	Chr9	135,161,599	135,178,797

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv3565372	insertion	HuRef	Sequencing	Paired-end mapping	23,887

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
essv3565372	Remapped	Pass	NW_009646201.1:g.( 122299_?)_(?_14823 4)ins10896	GRCh38.p12	Second Pass	NW_009646201.1	Chr9\|NW_00 9646201.1	122,299	148,234
essv3565372	Remapped	Pass	NC_000009.12:g.(13 3296205_?)_(?_1333 22140)ins10896	GRCh38.p12	First Pass	NC_000009.12	Chr9	133,296,205	133,322,140
essv3565372	Remapped	Pass	NW_003315925.1:g.( 122299_?)_(?_14823 4)ins10896	GRCh37.p13	Second Pass	NW_003315925.1	Chr9\|NW_00 3315925.1	122,299	148,234
essv3565372	Remapped	Perfect	NC_000009.11:g.(13 6171778_?)_(?_1361 88976)ins10896	GRCh37.p13	First Pass	NC_000009.11	Chr9	136,171,778	136,188,976
essv3565372	Submitted genomic		NC_000009.10:g.(13 5161599_?)_(?_1351 78797)ins10896	NCBI36 (hg18)		NC_000009.10	Chr9	135,161,599	135,178,797

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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