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dbVar

Database of genomic structural variation

esv994579

Organism: Homo sapiens

Study:estd180 (Pang et al. 2010)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:16,594

Publication(s):Pang et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 131 SVs from 39 studies. See in: genome view

Remapped(Score: Perfect):66,100,752-66,105,203

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
esv994579	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	66,100,752	66,105,203
esv994579	Remapped	Pass	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003315944.2	Chr15\|NW_0 03315944.2	192,563	209,156
esv994579	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	66,393,090	66,397,541
esv994579	Remapped	Pass	GRCh37.p13	PATCHES	Second Pass	NW_003315944.1	Chr15\|NW_0 03315944.1	192,563	209,156
esv994579	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000015.8	Chr15	64,180,144	64,184,595

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv3563650	insertion	HuRef	Sequencing	Paired-end mapping	23,887

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
essv3563650	Remapped	Pass	NW_003315944.2:g.( 192563_?)_(?_20915 6)ins13011	GRCh38.p12	Second Pass	NW_003315944.2	Chr15\|NW_0 03315944.2	192,563	209,156
essv3563650	Remapped	Perfect	NC_000015.10:g.(66 100752_?)_(?_66105 203)ins13011	GRCh38.p12	First Pass	NC_000015.10	Chr15	66,100,752	66,105,203
essv3563650	Remapped	Pass	NW_003315944.1:g.( 192563_?)_(?_20915 6)ins13011	GRCh37.p13	Second Pass	NW_003315944.1	Chr15\|NW_0 03315944.1	192,563	209,156
essv3563650	Remapped	Perfect	NC_000015.9:g.(663 93090_?)_(?_663975 41)ins13011	GRCh37.p13	First Pass	NC_000015.9	Chr15	66,393,090	66,397,541
essv3563650	Submitted genomic		NC_000015.8:g.(641 80144_?)_(?_641845 95)ins13011	NCBI36 (hg18)		NC_000015.8	Chr15	64,180,144	64,184,595

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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