nsv103302
- Organism: Homo sapiens
- Study:nstd6 (Mills et al. 2006)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:50
- Publication(s):Mills et al. 2006
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 120 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 19 SVs from 9 studies. See in: genome view
Overlapping variant regions from other studies: 4 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv103302 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 57,745,346 | 57,745,395 |
| nsv103302 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000016.9 | Chr16 | 57,779,258 | 57,779,307 |
| nsv103302 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003871085.1 | Chr16|NW_0 03871085.1 | 5,237 | 5,286 |
| nsv103302 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000016.8 | Chr16 | 56,336,759 | 56,336,808 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv121880 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv121880 | Remapped | Perfect | NC_000016.10:g.577 45346_57745395del5 0 | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 57,745,346 | 57,745,395 |
| nssv121880 | Remapped | Perfect | NW_003871085.1:g.5 237_5286del50 | GRCh37.p13 | First Pass | NW_003871085.1 | Chr16|NW_0 03871085.1 | 5,237 | 5,286 |
| nssv121880 | Remapped | Perfect | NC_000016.9:g.5777 9258_57779307del50 | GRCh37.p13 | Second Pass | NC_000016.9 | Chr16 | 57,779,258 | 57,779,307 |
| nssv121880 | Submitted genomic | NC_000016.8:g.5633 6759_56336808del50 | NCBI35 (hg17) | NC_000016.8 | Chr16 | 56,336,759 | 56,336,808 |