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dbVar

Database of genomic structural variation

nsv3067127

Organism: Homo sapiens

Study:nstd143 (Shang et al. 2017)
Variant Type:complex substitution
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:186,872

Description:NC_000016.9:g.94455_213000dup;NC_000016.9:g.21
3925_281325dup

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2014 SVs from 96 studies. See in: genome view

Remapped(Score: Good):44,455-231,326

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3067127	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	44,455	231,326
nsv3067127	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	94,455	281,325

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv14038740	complex substitution	Sequencing	Read depth and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14038740	Remapped	Good	GRCh38.p12	First Pass	NC_000016.10	Chr16	44,455	231,326
nssv14038740	Submitted genomic		GRCh37 (hg19)		NC_000016.9	Chr16	94,455	281,325

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)
nssv14038740	4.49e-005

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