nsv4382508
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:18
- Validation:Not tested
- Clinical Assertions: No
- Region Size:72,545
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1250 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 1250 SVs from 95 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4382508 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nsv4382508 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15615401 | copy number variation | 1-0771-003 | SNP array | Genotyping | 20 |
| nssv15615831 | copy number variation | 1-0786-004 | SNP array | Genotyping | 23 |
| nssv15618286 | copy number variation | 1-0862-002 | SNP array | Genotyping | 25 |
| nssv15618819 | copy number variation | 1-0889-003 | SNP array | Genotyping | 18 |
| nssv15620274 | copy number variation | 1-0956-003 | SNP array | Genotyping | 18 |
| nssv15622172 | copy number variation | 1-0208-003 | SNP array | Genotyping | 25 |
| nssv15623881 | copy number variation | 1-0255-001 | SNP array | Genotyping | 28 |
| nssv15633627 | copy number variation | 11-0036-003 | SNP array | Genotyping | 21 |
| nssv15636531 | copy number variation | 13-0132-002 | SNP array | Genotyping | 26 |
| nssv15642852 | copy number variation | 15-1111-001 | SNP array | Genotyping | 18 |
| nssv15644599 | copy number variation | 15-1134-002 | SNP array | Genotyping | 25 |
| nssv15664251 | copy number variation | 7-0052-003 | SNP array | Genotyping | 33 |
| nssv15665793 | copy number variation | 7-0094-004 | SNP array | Genotyping | 19 |
| nssv15668199 | copy number variation | 7-0180-003 | SNP array | Genotyping | 21 |
| nssv15678968 | copy number variation | 242266S | SNP array | Genotyping | 13 |
| nssv15692258 | copy number variation | OCD68-896041 | SNP array | Genotyping | 23 |
| nssv15698642 | copy number variation | 178826 | SNP array | Genotyping | 20 |
| nssv15702860 | copy number variation | 200218 | SNP array | Genotyping | 18 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|
| nssv15615401 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15615831 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15618286 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15618819 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15620274 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15622172 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15623881 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15633627 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15636531 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15642852 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15644599 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15664251 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15665793 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15668199 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15678968 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15692258 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15698642 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15702860 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 14,960,489 | 15,033,033 |
| nssv15615401 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15615831 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15618286 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15618819 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15620274 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15622172 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15623881 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15633627 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15636531 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15642852 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15644599 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15664251 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15665793 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15668199 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15678968 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15692258 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15698642 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 | ||
| nssv15702860 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 15,054,346 | 15,126,890 |