nsv4704795
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:801
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 531 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 327 SVs from 48 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4704795 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 41,008,272 | 41,009,072 |
| nsv4704795 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 69,081,501 | 69,082,301 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv16239942 | copy number variation | M456 | Sequencing | Paired-end mapping | 4 | 4,735 |
| nssv16243130 | copy number variation | M478 | Sequencing | Paired-end mapping | 4 | 4,557 |
| nssv16246210 | copy number variation | B381 | Sequencing | Paired-end mapping | 4 | 5,743 |
| nssv16252130 | copy number variation | B450 | Sequencing | Paired-end mapping | 4 | 4,473 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16239942 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 41,008,272 | 41,009,072 |
| nssv16243130 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 41,008,272 | 41,009,072 |
| nssv16246210 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 41,008,272 | 41,009,072 |
| nssv16252130 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 41,008,272 | 41,009,072 |
| nssv16239942 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 69,081,501 | 69,082,301 | ||
| nssv16243130 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 69,081,501 | 69,082,301 | ||
| nssv16246210 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 69,081,501 | 69,082,301 | ||
| nssv16252130 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 69,081,501 | 69,082,301 |