nsv4902894
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,311
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 373 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 374 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4902894 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000024.10 | ChrY | 12,930,280 | 12,936,590 | ||
| nsv4902894 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000024.9 | ChrY | 15,042,190 | 15,048,499 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16592164 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16592164 | Submitted genomic | NC_000024.10:g.129 30280_12936590del | GRCh38 (hg38) | NC_000024.10 | ChrY | 12,930,280 | 12,936,590 | ||
| nssv16592164 | Remapped | Good | NC_000024.9:g.1504 2190_15048499del | GRCh37.p13 | First Pass | NC_000024.9 | ChrY | 15,042,190 | 15,048,499 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16592164 | 0.001 | 20 | 15624 |