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nsv443003

  • Variant Calls:25
  • Validation:Yes
  • Clinical Assertions: No
  • Region Size:93,238
  • Description:Fosmids AC193142 and AC210900 contain complex alternate structure, with four deletions and with inversions
  • Publication(s):Young et al. 2008

Links to Other Resources

Genome View

Select assembly:
Overlapping variant regions from other studies: 2714 SVs from 106 studies. See in: genome view    
Remapped(Score: Perfect):55,597,042-55,690,279Question Mark
Overlapping variant regions from other studies: 2721 SVs from 106 studies. See in: genome view    
Remapped(Score: Perfect):55,364,518-55,457,755Question Mark
Overlapping variant regions from other studies: 946 SVs from 33 studies. See in: genome view    
Submitted genomic55,121,094-55,214,331Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv443003RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000011.10Chr1155,597,04255,690,279
nsv443003RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000011.9Chr1155,364,51855,457,755
nsv443003Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000011.8Chr1155,121,09455,214,331

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisCopy numberOther Calls in this Sample and Study
nssv1671957deletionGM01806SequencingSequence alignment0
nssv1671960deletionGM10540SequencingSequence alignment0nssv1672054
nssv1671961deletionGM10541SequencingSequence alignment0nssv1671927, nssv1671945
nssv1671962deletionGM10543SequencingSequence alignment0nssv1671918, nssv1672033, nssv1672053
nssv1671963deletionGM10976SequencingSequence alignment05
nssv1671964deletionGM10978SequencingSequence alignment0nssv1671948
nssv1671965deletionGM10969SequencingSequence alignment0nssv1672039
nssv1671966deletionGM10473SequencingSequence alignment1nssv1671985, nssv1672007
nssv1671967deletionGM17033SequencingSequence alignment1nssv1671919, nssv1671937, nssv1672012
nssv1671968deletionGM17036SequencingSequence alignment16
nssv1671969deletionGM17040SequencingSequence alignment16
nssv1671970deletionGM09948SequencingSequence alignment1nssv1671926, nssv1671987, nssv1672019
nssv1671971deletionGM01805SequencingSequence alignment1nssv1671915, nssv1672002, nssv1672056
nssv1671972deletionGM11522SequencingSequence alignment1nssv1672020
nssv1671973deletionGM11523SequencingSequence alignment1nssv1672022, nssv1672050
nssv1671974deletionGM10534SequencingSequence alignment1nssv1672018
nssv1671975deletionGM01814SequencingSequence alignment1nssv1671908, nssv1672015
nssv1671976deletionGM11524SequencingSequence alignment1nssv1671914, nssv1672024
nssv1671977deletionGM11373SequencingSequence alignment16
nssv1671978deletionGM10975SequencingSequence alignment1nssv1671909, nssv1672057
nssv1671979deletionGM10542SequencingSequence alignment1nssv1671916, nssv1672031, nssv1672055
nssv1671980deletionGM10968SequencingSequence alignment1nssv1671949, nssv1672038
nssv1671981deletionGM10965SequencingSequence alignment15
nssv1671982deletionGM10539SequencingSequence alignment1nssv1672030
nssv1671983deletionGM10979SequencingSequence alignment1nssv1671934, nssv1672000, nssv1672042

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv1671957RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671960RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671961RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671962RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671963RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671964RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671965RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671966RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671967RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671968RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671969RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671970RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671971RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671972RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671973RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671974RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671975RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671976RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671977RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671978RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671979RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671980RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671981RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671982RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671983RemappedPerfectNC_000011.10:g.555
97042_55690279del
GRCh38.p12First PassNC_000011.10Chr1155,597,04255,690,279
nssv1671957RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671960RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671961RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671962RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671963RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671964RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671965RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671966RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671967RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671968RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671969RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671970RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671971RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671972RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671973RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671974RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671975RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671976RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671977RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671978RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671979RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671980RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671981RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671982RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671983RemappedPerfectNC_000011.9:g.5536
4518_55457755del
GRCh37.p13First PassNC_000011.9Chr1155,364,51855,457,755
nssv1671957Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671960Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671961Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671962Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671963Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671964Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671965Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671966Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671967Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671968Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671969Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671970Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671971Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671972Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671973Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671974Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671975Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671976Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671977Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671978Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671979Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671980Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671981Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671982Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331
nssv1671983Submitted genomicNC_000011.8:g.5512
1094_55214331del
NCBI36 (hg18)NC_000011.8Chr1155,121,09455,214,331

Validation Information

Variant Call IDExperiment IDSample IDMethodAnalysisResult
nssv16719714GM01805MLPAProbe signal intensityPass
nssv16719574GM01806MLPAProbe signal intensityPass
nssv16719754GM01814MLPAProbe signal intensityPass
nssv16719704GM09948MLPAProbe signal intensityPass
nssv16719664GM10473MLPAProbe signal intensityPass
nssv16719744GM10534MLPAProbe signal intensityPass
nssv16719824GM10539MLPAProbe signal intensityPass
nssv16719604GM10540MLPAProbe signal intensityPass
nssv16719614GM10541MLPAProbe signal intensityPass
nssv16719794GM10542MLPAProbe signal intensityPass
nssv16719624GM10543MLPAProbe signal intensityPass
nssv16719814GM10965MLPAProbe signal intensityPass
nssv16719804GM10968MLPAProbe signal intensityPass
nssv16719654GM10969MLPAProbe signal intensityPass
nssv16719784GM10975MLPAProbe signal intensityPass
nssv16719634GM10976MLPAProbe signal intensityPass
nssv16719644GM10978MLPAProbe signal intensityPass
nssv16719834GM10979MLPAProbe signal intensityPass
nssv16719774GM11373MLPAProbe signal intensityPass
nssv16719724GM11522MLPAProbe signal intensityPass
nssv16719734GM11523MLPAProbe signal intensityPass
nssv16719764GM11524MLPAProbe signal intensityPass
nssv16719674GM17033MLPAProbe signal intensityPass
nssv16719684GM17036MLPAProbe signal intensityPass
nssv16719694GM17040MLPAProbe signal intensityPass
nssv16719715GM01805PCRManual observationPass
nssv16719575GM01806PCRManual observationPass
nssv16719755GM01814PCRManual observationPass
nssv16719705GM09948PCRManual observationPass
nssv16719665GM10473PCRManual observationPass
nssv16719745GM10534PCRManual observationPass
nssv16719825GM10539PCRManual observationPass
nssv16719605GM10540PCRManual observationPass
nssv16719615GM10541PCRManual observationPass
nssv16719795GM10542PCRManual observationPass
nssv16719625GM10543PCRManual observationPass
nssv16719815GM10965PCRManual observationPass
nssv16719805GM10968PCRManual observationPass
nssv16719655GM10969PCRManual observationPass
nssv16719785GM10975PCRManual observationPass
nssv16719635GM10976PCRManual observationPass
nssv16719645GM10978PCRManual observationPass
nssv16719835GM10979PCRManual observationPass
nssv16719775GM11373PCRManual observationPass
nssv16719725GM11522PCRManual observationPass
nssv16719735GM11523PCRManual observationPass
nssv16719765GM11524PCRManual observationPass
nssv16719675GM17033PCRManual observationPass
nssv16719685GM17036PCRManual observationPass
nssv16719695GM17040PCRManual observationPass

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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