nsv469855
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:19
- Validation:Not tested
- Clinical Assertions: No
- Region Size:133,881
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2467 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 2556 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 2 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469855 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nsv469855 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nsv469855 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1672512 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672571 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672615 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672768 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672781 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672904 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673092 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673202 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673373 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673786 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673799 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1674226 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1674570 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1674686 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675161 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676210 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676225 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676544 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676716 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1672512 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672571 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672615 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672768 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672781 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672904 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1673092 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1673202 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1673373 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1673786 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1673799 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1674226 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1674570 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1674686 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1675161 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1676210 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1676225 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1676544 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1676716 | Remapped | Perfect | NC_000014.9:g.(?_1 9902981)_(20036861 _?)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 19,902,981 | 20,036,861 |
| nssv1672512 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672571 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672615 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672768 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672781 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672904 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1673092 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1673202 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1673373 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1673786 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1673799 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1674226 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1674570 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1674686 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1675161 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1676210 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1676225 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1676544 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1676716 | Remapped | Perfect | NC_000014.8:g.(?_2 0371140)_(20505020 _?)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 20,371,140 | 20,505,020 |
| nssv1672512 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1672571 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1672615 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1672768 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1672781 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1672904 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1673092 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1673202 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1673373 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1673786 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1673799 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1674226 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1674570 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1674686 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1675161 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1676210 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1676225 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1676544 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 | ||
| nssv1676716 | Submitted genomic | NC_000014.6:g.(?_1 8361268)_(18495148 _?)del | NCBI34 (hg16) | NC_000014.6 | Chr14 | 18,361,268 | 18,495,148 |