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dbVar

Database of genomic structural variation

nsv6634476

Organism: Homo sapiens

Study:nstd225 (Xiao et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:280,001

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1065 SVs from 65 studies. See in: genome view

Remapped(Score: Perfect):68,706,097-69,026,097

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6634476	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	68,726,097 (-20000, +0)	69,006,097 (-0, +20000)
nsv6634476	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	68,760,000 (-20000, +0)	69,040,000 (-0, +20000)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis
nssv18326478	copy number loss	CNV08586	Sequencing	Read depth and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18326478	Remapped	Perfect	NC_000016.10:g.(68 706097_68726097)_( 69006097_69026097) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	68,726,097 (-20000, +0)	69,006,097 (-0, +20000)
nssv18326478	Submitted genomic		NC_000016.9:g.(687 40000_68760000)_(6 9040000_69060000)d el	GRCh37 (hg19)		NC_000016.9	Chr16	68,760,000 (-20000, +0)	69,040,000 (-0, +20000)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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