nsv949742
- Organism: Homo sapiens
- Study:nstd85 (vanSilfhout et al. 2013)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,012,024
- Publication(s):Vulto-van Silfhout et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2820 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 2830 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 160 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv949742 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 6,903,064 | 7,915,087 |
| nsv949742 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 6,821,105 | 7,883,128 |
| nsv949742 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000023.8 | ChrX | 6,680,841 | 7,692,864 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv2768495 | copy number loss | SNP array | SNP genotyping analysis | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2768495 | Remapped | Perfect | NC_000023.11:g.(?_ 6903064)_(7915087_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 6,903,064 | 7,915,087 |
| nssv2768495 | Remapped | Good | NC_000023.10:g.(?_ 6821105)_(7883128_ ?)del | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 6,821,105 | 7,883,128 |
| nssv2768495 | Submitted genomic | NC_000023.8:g.(?_6 680841)_(7692864_? )del | NCBI35 (hg17) | NC_000023.8 | ChrX | 6,680,841 | 7,692,864 |