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dbVar

Database of genomic structural variation

nsv475391

Organism: Homo sapiens

Study:nstd35 (Kidd et al. 2010)
Variant Type:complex substitution
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:12

Description:complex allele - no allele length provided
Publication(s):Kidd et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 131 SVs from 43 studies. See in: genome view

Remapped(Score: Perfect):7,844,549-7,844,560

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv475391	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	7,844,549	7,844,560
nsv475391	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_011332695.1	Chr11\|NW_0 11332695.1	75,543	75,554
nsv475391	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	7,866,096	7,866,107
nsv475391	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000011.8	Chr11	7,822,672	7,822,683

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3020474	complex substitution	NA19240	Sequencing	Sequence alignment	627

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv3020474	Remapped	Perfect	GRCh38.p12	Second Pass	NW_011332695.1	Chr11\|NW_0 11332695.1	75,543	75,554
nssv3020474	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	7,844,549	7,844,560
nssv3020474	Remapped	Perfect	GRCh37.p13	First Pass	NC_000011.9	Chr11	7,866,096	7,866,107
nssv3020474	Submitted genomic		NCBI36 (hg18)		NC_000011.8	Chr11	7,822,672	7,822,683

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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