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dbVar

Database of genomic structural variation

nsv1068623

Organism: Homo sapiens

Study:nstd99 (Thareja et al. 2015)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Thareja et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 142 SVs from 28 studies. See in: genome view

Remapped(Score: Perfect):137,638,471-137,638,471

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv1068623	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	137,638,471	137,638,471	+
nsv1068623	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	53,515,084	53,515,084	-
nsv1068623	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	137,323,217	137,323,217	+
nsv1068623	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	53,807,281	53,807,281	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3773078	interchromosomal translocation	KWP1	Sequencing	Read depth and paired-end mapping	11,116

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv3773078	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	137,638,471	137,638,471	+
nssv3773078	Remapped	Perfect	GRCh38.p12	First Pass	NC_000015.10	Chr15	53,515,084	53,515,084	-
nssv3773078	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	137,323,217	137,323,217	+
nssv3773078	Submitted genomic		GRCh37 (hg19)		NC_000015.9	Chr15	53,807,281	53,807,281	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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