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dbVar

Database of genomic structural variation

nsv1160783

Organism: Homo sapiens

Study:nstd111 (Lou et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:33,924

Publication(s):Lou et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 157 SVs from 31 studies. See in: genome view

Remapped(Score: Perfect):50,762,104-50,796,027

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1160783	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	50,762,104	50,766,016	50,796,027	50,796,027
nsv1160783	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000022.10	Chr22	51,200,532	51,204,444	51,234,455	51,234,455

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv4040908	duplication	SNP array	Probe signal intensity	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv4040908	Remapped	Perfect	NC_000022.11:g.(50 762104_50766016)_( 50796027_50796027) dup	GRCh38.p12	First Pass	NC_000022.11	Chr22	50,762,104	50,766,016	50,796,027	50,796,027
nssv4040908	Submitted genomic		NC_000022.10:g.(51 200532_51204444)_( 51234455_51234455) dup	GRCh37 (hg19)		NC_000022.10	Chr22	51,200,532	51,204,444	51,234,455	51,234,455

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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